Insertion junction: CLIP2.001134_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001134
Chromosome:chromosome 1
Location:520773
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003150 protein of unknown function 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTAAAAGGCGAAAGAGATATTCGCTACGCGTTCAGCTCACCGCGGATA
Internal bar code:GTTTAGGAGATGGGGTGAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1019
LEAP-Seq percent confirming:80.5556
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACAAATGCACACACAGT
Suggested primer 2:CAAACATGAGGCGGCGTATG