Insertion junction: CLIP2.001143_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001143
Chromosome:chromosome 3
Location:3850475
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170300 SUB5 (1 of 1) 3.4.24.30 - Coccolysin / Streptococcus thermophilus intracellular proteinase; Subtilisin-like protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGTAGGCGCTGGGTTCGTGTCACAGGCACCGGCGACATCAACCCCAG
Internal bar code:CCTTAGCAAATGGAAGGGCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1045
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGTGATTGCTGCTGCC
Suggested primer 2:CCGCGAGCAGGTCTGATAAT