Insertion junction: CLIP2.001144_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001144
Chromosome:chromosome 2
Location:583639
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077100 GSH1 (1 of 1) 6.3.2.2 - Glutamate--cysteine ligase / Gamma-glutamylcysteine synthetase; Gamma-glutamylcysteine synthetase 3'UTR
Cre02.g077150 CPLD14 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF05684 - Protein of unknown function (DUF819) (DUF819) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGCTCAATCTAAAACAATACAACTCCTGCGGGCATTCGAGCTGAAAC
Internal bar code:CAAATTGGAGGAGCTGAACACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:70.7692
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAAGAGGTGAGCTGAACT
Suggested primer 2:TTGCGGTGGGATGCATAGTT