Insertion junction: CLIP2.001147_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001147
Chromosome:chromosome 6
Location:1926380
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264400 (1 of 1) PTHR13992:SF7 - SMRTER, ISOFORM G CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCATCGACGTCGGACGCAGCGGAGGCGGGCCAGGCGGCGGCAGCGGTG
Internal bar code:AAGAGTGGTCGGGTCTCAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACAATAACCTCCACCAGCGG
Suggested primer 2:GGGTTGTCAGCTCGGATTGA