Insertion junction: CLIP2.001152_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001152
Chromosome:chromosome 3
Location:7299499
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207000 (1 of 1) PTHR34543:SF1 - ABSCISIC ACID (ABA)-DEFICIENT 4 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGTCCGCGGGCCAATTATGGCACTTCCAGCTTGAGTAATACGCACCG
Internal bar code:GTTAAGAGCTAGCGCGATCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5191
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:145

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGAATCTAGGCAGCTCA
Suggested primer 2:TAACGCCATTTTGCAACGCA