Insertion junction: CLIP2.001155_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001155
Chromosome:chromosome 12
Location:7214267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g559050 (1 of 1) PTHR24006//PTHR24006:SF22 - FAMILY NOT NAMED // BCDNA.LD22910 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCATCTATGGCTGCCCCTTCCCAGGCCCAGCCCCAGCTTCCAGGACAA
Internal bar code:CGGCCATTAAGAGTTCACGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2314
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:AACACACTTGCGGTTGATGC
Suggested primer 2:CGCACCCTTAGTAGCTAGGC