Insertion junction: CLIP2.001162_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001162
Chromosome:chromosome 1
Location:4805150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033450 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGATTTGGCCAACTGCTTAATGCGCTTGCAAGCCTCCAGGTCGCCGGC
Internal bar code:GTGTTTTGTGTATCGAATAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2658
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCAAGCATGTCGCAGT
Suggested primer 2:CCTGCCTTGTCGTTCCAGAT