Insertion junction: CLIP2.001163_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001163
Chromosome:chromosome 12
Location:2279892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g508300 CGL144 Conserved in the Green Lineage; (1 of 3) PF04359 - Protein of unknown function (DUF493) (DUF493) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTTTGACGCGGTGGCATCCGAGCTTCTTTGCTGTTCGCAAAGGGCAG
Internal bar code:TGGAGCAGTAAGTCTCTGATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3743
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:CTACACCAATCATGCGTGCG
Suggested primer 2:TACATCTATTGCCGGTCCGC