Insertion junction: CLIP2.001165_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001165
Chromosome:chromosome 12
Location:7218318
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g559050 (1 of 1) PTHR24006//PTHR24006:SF22 - FAMILY NOT NAMED // BCDNA.LD22910 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCAAACACACTTCACGGTGCTCGGCTCCTCAGCTTCAGGCAACACAT
Internal bar code:ACGGGATTCGCTCTTGGAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGGCGATGGAGTGTTT
Suggested primer 2:GCATAATCTCGCACAGTCGC