Insertion junction: CLIP2.001169_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001169
Chromosome:chromosome 6
Location:2579129
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269752 TRXm,TRXM1,TRX15 (1 of 1) IPR000104//IPR005746//IPR012336//IPR013766 - Antifreeze protein, type I // Thioredoxin // Thioredoxin-like fold // Thioredoxin domain; Thioredoxin m, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCACCAACGCCCGTTGCACATACCCGTGGCTTCCCCCCCGAGGTGCC
Internal bar code:CCCACGTATCGTGAGACTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1477
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCGAGGAAAACAAGGGA
Suggested primer 2:CAGGTTCAAAGTGGTTGGCG