Insertion junction: CLIP2.001184_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001184
Chromosome:chromosome 5
Location:110690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242178 (1 of 1) PTHR23344//PTHR23344:SF10 - GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACATTACTTGTTGCCTGTACTTGTGCGTTTGTCTGTGCACACAAGTAA
Internal bar code:TCGAAGAACGTTTTAGCATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:559
LEAP-Seq percent confirming:88.4615
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCTCCACATAGCGCAGG
Suggested primer 2:ATAGGACCCAGCTCGTCACT