Insertion junction: CLIP2.001186_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001186
Chromosome:chromosome 2
Location:3474832
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCGCATCAAGGTGGCTTACCCGCGTTGGCCGGCGGCTCGCCGCCATGC
Internal bar code:TGCTTGACGTGACATCCCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:79.661
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCAAGACCAGGGGCAAT
Suggested primer 2:GTCAAGCATACTGGCGCATG