Insertion junction: CLIP2.001186_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001186
Chromosome:chromosome 2
Location:3474846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g099000 SYP71 Qc-SNARE protein, SYP7-family; (1 of 2) K08506 - syntaxin of plants SYP7 (SYP7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACGCAGAGTGGTGCACACTCGACATACCCTCTAGTGAACACATGCTT
Internal bar code:GCTAACGTAGACGGGACGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3634
LEAP-Seq percent confirming:9.52381
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAGCATACTGGCGCATG
Suggested primer 2:CCATCAAGACCAGGGGCAAT