Insertion junction: CLIP2.001195_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001195
Chromosome:chromosome 9
Location:6387526
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414600 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCCTGGGGAAGGCTACCTGGAATGTCACGTCAGGCTAGCACCCGGCG
Internal bar code:GCTTTATTGGTATCTAAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5338
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAAGCAGAAGCACAAGC
Suggested primer 2:CACCCCCAAAATTTTCGCGT