Insertion junction: CLIP2.001197_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001197
Chromosome:chromosome 1
Location:2179802
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g012200 (1 of 3) PF00651//PF03110 - BTB/POZ domain (BTB) // SBP domain (SBP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTCTTGCTATCATTCACCATCATCTCTGTCTCAGCGTGTGCTCCCTGC
Internal bar code:AGACGCGCTATTCATGGCGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5025
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATACACCCCTAACTCGC
Suggested primer 2:CTCGTGTATCGGTCCAGACG