Insertion junction: CLIP2.001198_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001198
Chromosome:chromosome 10
Location:5628528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458700 (1 of 6) PF07719//PF13414 - Tetratricopeptide repeat (TPR_2) // TPR repeat (TPR_11) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGGGCTGTGTTGGGATGCATCCCTCCTTTCGTGGGGTAAGAGCGTGGG
Internal bar code:TTAGCCGGGAGGACATCTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4002
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGGCGCTTTAGAACAT
Suggested primer 2:TCCCAAACAGGCCATAGCTG