Insertion junction: CLIP2.001202_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001202
Chromosome:chromosome 13
Location:668234
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566200 CGL112 possible transcription factor; (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCACACTCTGTCCTGGGACGCATCCCACCAGCCACGGCCACAAGGCCG
Internal bar code:TGTTGTACTTCCAAGTATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:136
LEAP-Seq percent confirming:10.5263
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCCGAGAACCTGATGA
Suggested primer 2:CAAACAAGCCCTGCTCACAC