Insertion junction: CLIP2.001202_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001202
Chromosome:chromosome 13
Location:668240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g566200 CGL112 possible transcription factor; (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCCTGGGGGGAAAACCATCAGCCAGCTACAAGACTGCTCCGCCACTCC
Internal bar code:TGTTGTACTTCCAAGTATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1966
LEAP-Seq percent confirming:80.8511
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACAAGCCCTGCTCACAC
Suggested primer 2:CAAGCCCGAGAACCTGATGA