Insertion junction: CLIP2.001208_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001208
Chromosome:chromosome 12
Location:2780592
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g504000 (1 of 2) PTHR12121:SF34 - LD39302P 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGCAAACCAAACGAAGAAATGTTGGGGCGGGCGTGGTCTCAGCCAC
Internal bar code:TGAAATTAAGGAGGTATTTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1094
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCACCCTTAGATGCCG
Suggested primer 2:CTGCTACATCCCCAAAGCCA