Insertion junction: CLIP2.001211_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001211
Chromosome:chromosome 3
Location:5547533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185200 CPL3,MPA6 (1 of 3) PTHR11668//PTHR11668:SF267 - SERINE/THREONINE PROTEIN PHOSPHATASE // SUBFAMILY NOT NAMED; protein ser/thr phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTTAAGGAATCCCGAGTTGCATCCCTGCCCCGCCCAAACCTGCACCTG
Internal bar code:GGGTGCGGTGCTGAGTTAGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3473
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCATCACCCGCCATCTCTAC
Suggested primer 2:TGCGCTTCGTTCATCTGTCT