Insertion junction: CLIP2.001214_5

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001214
Chromosome:chromosome 12
Location:2075714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510300 UBC21 E2 Ubiquitin conjugating enzyme; (1 of 1) PF00179//PF10408 - Ubiquitin-conjugating enzyme (UQ_con) // Ubiquitin elongating factor core (Ufd2P_core) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTAATAGGGACGCCAGCACGTCACCACCACCGCCAGCGCCCGCTGCCT
Internal bar code:TGTGGATCGCGGCAAATAGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5278
LEAP-Seq percent confirming:98.7805
LEAP-Seq n confirming:81
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTAGCGCGTTTGCAAAA
Suggested primer 2:GGTGCGACAGTGGGAAAAAC