Insertion junction: CLIP2.001216_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001216
Chromosome:chromosome 6
Location:1885606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTGAGGTGAAAGTGAAACACCGGTGTCTCGAACTGGAGGTAGGGTCT
Internal bar code:CTGAAGTTTGGAAGTGTGCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCATCGCCAAGACGCATC
Suggested primer 2:CAGCTGATGGGGAGGTCAAG