Insertion junction: CLIP2.001217_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001217
Chromosome:chromosome 12
Location:564838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g494000 CGL82 (1 of 2) IPR002083//IPR008974 - MATH/TRAF domain // TRAF-like; Conserved, expressed protein with meprin and TRAF homology domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCAAACTAGAACAACAGCCGGCACGCCAGCATCGGTCAAGCCAGAGA
Internal bar code:GCCTATGAGAGGCGCTGGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1782
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGATGCAGCGGTCTAC
Suggested primer 2:TTATCAGTTGCCCGCATGGT