Insertion junction: CLIP2.001218_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001218
Chromosome:chromosome 7
Location:5070376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347850 (1 of 1) PF08123 - Histone methylation protein DOT1 (DOT1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAATCACAAGCCCTCAAAGTCCAGCACATACACACACAAAGCCTTTCG
Internal bar code:TTAGACTCGTGTTCGCACGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2271
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCGCCTCTCTCTTTCTA
Suggested primer 2:TTGATCAGCCTCCCAGCTTG