Insertion junction: CLIP2.001219_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001219
Chromosome:chromosome 7
Location:5412486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g350500 TSV,TSV1 Valyl-tRNA synthetase; (1 of 1) PTHR11946//PTHR11946:SF76 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // ATP BINDING/VALINE-TRNA LIGASE/AMINOACYL-TRNA LIGASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATTACTACATACAGAGCTGTACTGCCGTAGCGCCCCAGACACGTGCCC
Internal bar code:TCGGTTGAGCTCATAGTTCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1252
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAGAGCACGAGAGCTTT
Suggested primer 2:CACAGGGTTGCAACAGGTTG