Insertion junction: CLIP2.001223_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001223
Chromosome:chromosome 16
Location:5248228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCGGGCCGGTTCTACGGCTGCTGCAGCCGCTGCTGTGTCGGCTGCG
Internal bar code:TCAGCATAGAAATCCGTCGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2857
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTATACTCAGCCGTCAC
Suggested primer 2:GGCAGCAGCTTCGACTATCA