Insertion junction: CLIP2.001229_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001229
Chromosome:chromosome 1
Location:1973135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010864 (1 of 1) K02836 - peptide chain release factor 2 (prfB); Homolog to bacterial PrfB peptide chain release factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACACACACACACACACACACACACCTCCAGGTCCTTCTCAT
Internal bar code:AGGGACAATGGCCTAGCGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACCCTCCCACTCCCTC
Suggested primer 2:AAGAGGTCGTGGCAGACAAG