Insertion junction: CLIP2.001230_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001230
Chromosome:chromosome 6
Location:5454066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285950 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGATGCCCCAGGGCGCCGTCCGCAGGGTTATACACTTGTGTGTCGTAG
Internal bar code:CCCAGCTTCCTTGGCAAAATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3252
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:140
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCCTCAAGCCCTTTCCG
Suggested primer 2:GGAACAAGCAAAGGCAGAGC