Insertion junction: CLIP2.001231_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001231
Chromosome:chromosome 3
Location:1941333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155250 (1 of 1) IPR002202//IPR029058 - Hydroxymethylglutaryl-CoA reductase, class I/II // Alpha/Beta hydrolase fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCGGAAGGAACCGGCCGATGTGCGAGGGGGCGGTTGGATAAGGTGA
Internal bar code:CAAAGTTAGGCGGGTGCGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2375
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGCACAGGTCAAAACAC
Suggested primer 2:GGACATGACAGACAGTGGGG