Insertion junction: CLIP2.001239_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001239
Chromosome:chromosome 6
Location:3295303
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g277350 HDA13 RPD3/HDA1 type histone deacetylase; (1 of 4) K06067 - histone deacetylase 1/2 (HDAC1_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCACCACCCCGCCCCGCACCTTGACCTTGTAGCCGCCGCCGCCCAGC
Internal bar code:TGCAACAGGGGGGGAATAGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:659
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCAGAGGCGAAAGTTGA
Suggested primer 2:TCAACCACACGGAACACACA