Insertion junction: CLIP2.001245_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001245
Chromosome:chromosome 3
Location:1697722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGGCGGTTGGGGGGCAAGGGAGGCCAATCCGCTGATCGTGTCAGTT
Internal bar code:CGGCTGGGTTTATCGGTCTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1780
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAAGTGTGCTG
Suggested primer 2:CGTGTGATGCCTTCCAGAGT