Insertion junction: CLIP2.001261_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001261
Chromosome:chromosome 1
Location:6090606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g043200 CGLD6 conserved expressed protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACATCAGCGCGGGGCATCCTGATGACGACGTGCTGATTATTAAGGTGT
Internal bar code:TTACACCTATGAATTAGTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4256
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAATCTTGTCGCTGACT
Suggested primer 2:ATCAAACGGTATGCATGCGC