Insertion junction: CLIP2.001267_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001267
Chromosome:chromosome 17
Location:2507083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715700 VTC3,PPP44,PP2C5 (1 of 1) PF00481//PF07714 - Protein phosphatase 2C (PP2C) // Protein tyrosine kinase (Pkinase_Tyr); protein phosphatase 2C-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACTGAACCCCACCTCACCTATGCAATATGCCCAAGCACAAACACGC
Internal bar code:TGACAGATATAGGGGGTTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2392
LEAP-Seq percent confirming:43.1818
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGTACTTCACGCACTGGC
Suggested primer 2:TGTGAACAGCCCCTTGTTGT