Insertion junction: CLIP2.001269_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001269
Chromosome:chromosome 11
Location:4182551
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481450 ATPG1,ATPG Chloroplast ATP synthase subunit II; (1 of 2) K02109 - F-type H+-transporting ATPase subunit b (ATPF0B, atpF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGCCGGCGAGTTCCTGCTGCTGATGGTGTTCCTGGAGAAGACCTGGT
Internal bar code:GAGTGGTTAGTGTCACTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:878
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGGATAACCACGCGCAAG
Suggested primer 2:ATTAGTGGGTCGACGCGTAC