Insertion junction: CLIP2.001269_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001269
Chromosome:chromosome 11
Location:4182554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g481450 ATPG1,ATPG Chloroplast ATP synthase subunit II; (1 of 2) K02109 - F-type H+-transporting ATPase subunit b (ATPF0B, atpF) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGGGCAGGGTCAGGTTGAAGTCGAAAATCTTGCCGGCCTCGGCGGC
Internal bar code:GAGTGGTTAGTGTCACTGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGTGGGTCGACGCGTAC
Suggested primer 2:CAAGGATAACCACGCGCAAG