Insertion junction: CLIP2.001275_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001275
Chromosome:chromosome 15
Location:2065480
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g142146 HCF244,CGL102 (1 of 1) PTHR14194//PTHR14194:SF81 - NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED // SUBFAMILY NOT NAMED; PSII biogenesis protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGTACGTCTCCGCCATGTCAGCGGCCGATGCCTGCCACACCTCGTTGT
Internal bar code:GATTTACGAGGGTTAGGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CTCAGCATGCCGCAATACAC
Suggested primer 2:AACGAAAAGAAACACCGGCG