Insertion junction: CLIP2.001276_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001276
Chromosome:chromosome 12
Location:9427076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541211 putative protein kinase; (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGCTGTCTGTGCGGGGCGTCGGCACCCATGGGGTCGTGTGTGCCCAT
Internal bar code:TTGTGGTGTCTCCATGTCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1115
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCTTTTCGGCCTCCAAT
Suggested primer 2:GTGACGCAACTCACTCTCCA