Insertion junction: CLIP2.001295_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001295
Chromosome:chromosome 6
Location:3511805
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278117 CPLD7 Conserved in the Plant Lineage and Diatoms; (1 of 98) IPR023214 - HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACCTGCCCACGCCACTTCTCCCGTCCGAGGCCACAATCGTCCAAAGC
Internal bar code:AGTGGGCTATTATAGGAAGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1280
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGAGCGTGTGGACACT
Suggested primer 2:AGGGGGAGCTGGTAGAGAAG