Insertion junction: CLIP2.001296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001296
Chromosome:chromosome 6
Location:1915289
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g264300 PRPS15 (1 of 2) IPR005290 - Ribosomal protein S15, bacterial-type; Chloroplast ribosomal protein S15 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTACGACCGCTCCTCCGACTTGCGGGCGGCACCGCGGGTGTCGCCAAC
Internal bar code:GTAACTGCGAGCTAGGGTAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4699
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGCTCGCATTATGCAAA
Suggested primer 2:GTCTTATCCACCCCGCTAGC