Insertion junction: CLIP2.001297_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001297
Chromosome:chromosome 12
Location:4555890
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g521450 CLPP2 (1 of 1) PTHR10381//PTHR10381:SF11 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIAL-RELATED; peptidase subunit of mitochondrial ClpXP protease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCTTGGGGTCCCAGCTCGGTTATGCTATTTGTAGTCGCACGCACCGG
Internal bar code:GCATTATCAAGTAGACAAAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1798
LEAP-Seq percent confirming:87.9518
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGACTGCTTGACGGTGTA
Suggested primer 2:CCCTGCAATCCTCACACAGT