Insertion junction: CLIP2.001300_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.001300
Chromosome:chromosome 12
Location:1403519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCACACCAGCCCCCCGGGCCGCGGGCCGCTCCAGCCGCAACACCAGC
Internal bar code:AAGCGGAATGCAGGTATTGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1533
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTCAGACCACTGGAGG
Suggested primer 2:AGGCACTCCGTGGGTTTAAG