Insertion junction: CLIP2.001303_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.001303
Chromosome:chromosome 8
Location:2251265
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g370550 (1 of 1) 1.1.99.39 - D-2-hydroxyglutarate dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGAATGCGCCGCCCCTTGCTGCCCGCGTCGCACTCGCCGTGAAGCGC
Internal bar code:TACGGACTGTGTAGTTTTGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GACCAGTCCCATTTCGCTGA
Suggested primer 2:GCGGTTCAACCTGCACAAAT