Insertion junction: CLIP2.001310_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.001310
Chromosome:chromosome 13
Location:2281486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578600 (1 of 1) PTHR35464//PTHR35464:SF1 - FAMILY NOT NAMED // F18O14.9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGGAGGAGTCATGCATGTTCTGCGACCACACCTAACCCCACACCTCA
Internal bar code:CTTGAGGGCCGAAACCAGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:81
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCACGACCCACACATGA
Suggested primer 2:CTTCTCCGTAGTGCTAGCGG