Insertion junction: CLIP2.001310_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001310
Chromosome:chromosome 13
Location:2281491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578600 (1 of 1) PTHR35464//PTHR35464:SF1 - FAMILY NOT NAMED // F18O14.9 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTCCTCGACCCGCCTCCACACCAGAGCGTCGCAAGCCCCTGCCAACC
Internal bar code:CTTGAGGGCCGAAACCAGCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCCGTAGTGCTAGCGG
Suggested primer 2:CTGTCACGACCCACACATGA