Insertion junction: CLIP2.001315_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.001315
Chromosome:chromosome 6
Location:6358547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293150 PGM12 (1 of 2) PTHR23029:SF12 - PHOSPHOMUTASE PMU1-RELATED; Phosphoglycerate mutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACAACCGGCCGCGCGGCCAAGACCTTCACACCCGAGGCGCCGCAACC
Internal bar code:CCACCACCTGTGGTCACACTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:533
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTTCTCTTCCCTCCCTG
Suggested primer 2:CGAAGGAAGATACGAGCGCT