Insertion junction: CLIP2.001315_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.001315
Chromosome:chromosome 13
Location:2433624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579550 CGL27 Conserved in the Green Lineage; (1 of 5) IPR002645 - STAS domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCAAAGCCTTATCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAG
Internal bar code:AAAGCATCTGCACCTCTTATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:299
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCATCCTGGTGAGAAGC
Suggested primer 2:TGTTGCTCCTGATCCTGCTG