Insertion junction: CLIP2.001317_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.001317
Chromosome:chromosome 6
Location:3434586
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278099 (1 of 2) IPR003382 - Flavoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGATGTCCTTGTTGGCGTTGGCCAACTCCTGCGGGACAGCCTTCGCC
Internal bar code:TAATGGGTTCTGCCTTACGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1732
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATTGACAGTGCTTGCAA
Suggested primer 2:CCACTTGAATGTTGCCGCAA