Insertion junction: CLIP2.001322_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001322
Chromosome:chromosome 12
Location:5864076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533351 CLPB5 (1 of 3) K03695 - ATP-dependent Clp protease ATP-binding subunit ClpB (clpB); ClpB chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCACATGGTCTCTTCTGGTTGAAACCAACGTTAAAACAAAGTAACCC
Internal bar code:GTATTAAGTTCGACTTTCCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:74.026
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTGCACCATCCCTCAAT
Suggested primer 2:GAGGTGGGTGGGGTTATGTG