Insertion junction: CLIP2.001325_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.001325
Chromosome:chromosome 13
Location:164849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563150 PAB1,CGLD8 Assembly factor for CF1 or F1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGGCGGGGCTCAGCGATGTGGCCAACTTCATCCAGGCCGCATAAATA
Internal bar code:AGGAGGGTGTCAATTAGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2202
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACCACTTCATCAAGCGT
Suggested primer 2:CCCCCACACACACACATACA