Insertion junction: CLIP2.001328_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.001328
Chromosome:chromosome 12
Location:3416344
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497750 TSPP1,TPS2 Trehalose 6-phosphate phosphatase; (1 of 1) K01087 - trehalose 6-phosphate phosphatase (otsB) 5'UTR
Cre12.g497800 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCATGCAGCATTAAGTCCAACCGCTTGACTGTCACGCCACTTCTACTT
Internal bar code:CGTTGTACGAGTTGTTTCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2888
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCTCCTGCGCATTTAGC
Suggested primer 2:CCTGCGATGGCTACCGTATT